STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO96585.1Aspartate/tyrosine/aromatic aminotransferase. (393 aa)    
Predicted Functional Partners:
AKO96805.1
Arginase; Belongs to the arginase family.
   
 
 0.904
AKO96332.1
Arginine/lysine/ornithine decarboxylase.
     
 0.902
argH
Argininosuccinate lyase.
  
 
 0.820
AKO96584.1
TfoX C-terminal domain protein.
       0.773
AKO97706.1
Prephenate dehydratase.
 
  
 0.751
AKO98449.1
Ribulose-5-phosphate 4-epimerase; And related epimerases and aldolases.
 
  
 0.672
AKO96586.1
Hypothetical protein.
       0.609
AKO95289.1
Aspartokinase.
  
 0.608
AKO96556.1
Aspartate kinase, monofunctional class; Belongs to the aspartokinase family.
  
 0.608
AKO96420.1
Malate/L-lactate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
     
 0.526
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.