STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO96599.1ABC-type uncharacterized transport system, periplasmic component. (222 aa)    
Predicted Functional Partners:
AKO96598.1
ABC-type uncharacterized transport system, permease component; Belongs to the NiCoT transporter (TC 2.A.52) family.
 
   
 0.969
AKO96600.1
Cupin domain protein.
       0.580
AKO97901.1
Hypothetical protein.
  
     0.510
AKO97844.1
Hypothetical protein.
  
     0.502
AKO97945.1
Hypothetical protein.
  
     0.440
AKO97172.1
Hypothetical protein.
  
     0.416
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.