STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO96612.1Hypothetical protein. (374 aa)    
Predicted Functional Partners:
AKO96611.1
Hypothetical protein.
 
   
 0.807
AKO96788.1
Hypothetical protein.
  
     0.594
AKO96763.1
Hypothetical protein; DUF2328.
  
    0.545
AKO98062.1
Hypothetical protein.
  
     0.519
recA
Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
   
  
 0.514
AKO97298.1
Phage portal protein, HK97 family.
  
    0.502
AKO97299.1
Phage DNA Packaging Protein.
 
     0.476
AKO97291.1
Gene Transfer Agent tail protein-1 family; TP901.
  
     0.470
AKO97875.1
RecD-like DNA helicase.
  
    0.459
AKO98650.1
Hypothetical protein.
  
  
 0.459
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.