Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKO96444.1 | AKO96632.1 | MALG_01259 | MALG_01447 | DNA-directed RNA polymerase specialized sigma subunit, sigma54-like protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Signal transduction histidine kinase NR(II), nitrogen specific. | 0.424 |
| AKO96444.1 | AKO96633.1 | MALG_01259 | MALG_01448 | DNA-directed RNA polymerase specialized sigma subunit, sigma54-like protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Nitrogen regulation protein NtrC. | 0.673 |
| AKO96444.1 | AKO96635.1 | MALG_01259 | MALG_01450 | DNA-directed RNA polymerase specialized sigma subunit, sigma54-like protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Nitrogen assimilation regulatory protein NtrX. | 0.759 |
| AKO96444.1 | AKO96912.1 | MALG_01259 | MALG_01739 | DNA-directed RNA polymerase specialized sigma subunit, sigma54-like protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Signal transduction histidine kinase. | 0.418 |
| AKO96444.1 | AKO97831.1 | MALG_01259 | MALG_02674 | DNA-directed RNA polymerase specialized sigma subunit, sigma54-like protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Signal transduction histidine kinase. | 0.513 |
| AKO96628.1 | AKO96631.1 | MALG_01443 | MALG_01446 | Competence/damage-inducible protein CinA C-terminal domain protein; Belongs to the CinA family. | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.715 |
| AKO96628.1 | AKO96632.1 | MALG_01443 | MALG_01447 | Competence/damage-inducible protein CinA C-terminal domain protein; Belongs to the CinA family. | Signal transduction histidine kinase NR(II), nitrogen specific. | 0.715 |
| AKO96628.1 | AKO96633.1 | MALG_01443 | MALG_01448 | Competence/damage-inducible protein CinA C-terminal domain protein; Belongs to the CinA family. | Nitrogen regulation protein NtrC. | 0.588 |
| AKO96628.1 | AKO96634.1 | MALG_01443 | MALG_01449 | Competence/damage-inducible protein CinA C-terminal domain protein; Belongs to the CinA family. | Nitrogen regulation protein NtrY. | 0.630 |
| AKO96628.1 | AKO97831.1 | MALG_01443 | MALG_02674 | Competence/damage-inducible protein CinA C-terminal domain protein; Belongs to the CinA family. | Signal transduction histidine kinase. | 0.430 |
| AKO96628.1 | ispDF | MALG_01443 | MALG_01445 | Competence/damage-inducible protein CinA C-terminal domain protein; Belongs to the CinA family. | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF). | 0.868 |
| AKO96631.1 | AKO96628.1 | MALG_01446 | MALG_01443 | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Competence/damage-inducible protein CinA C-terminal domain protein; Belongs to the CinA family. | 0.715 |
| AKO96631.1 | AKO96632.1 | MALG_01446 | MALG_01447 | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Signal transduction histidine kinase NR(II), nitrogen specific. | 0.938 |
| AKO96631.1 | AKO96633.1 | MALG_01446 | MALG_01448 | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Nitrogen regulation protein NtrC. | 0.814 |
| AKO96631.1 | AKO96634.1 | MALG_01446 | MALG_01449 | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Nitrogen regulation protein NtrY. | 0.739 |
| AKO96631.1 | AKO96635.1 | MALG_01446 | MALG_01450 | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Nitrogen assimilation regulatory protein NtrX. | 0.620 |
| AKO96631.1 | ispDF | MALG_01446 | MALG_01445 | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF). | 0.715 |
| AKO96632.1 | AKO96444.1 | MALG_01447 | MALG_01259 | Signal transduction histidine kinase NR(II), nitrogen specific. | DNA-directed RNA polymerase specialized sigma subunit, sigma54-like protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.424 |
| AKO96632.1 | AKO96628.1 | MALG_01447 | MALG_01443 | Signal transduction histidine kinase NR(II), nitrogen specific. | Competence/damage-inducible protein CinA C-terminal domain protein; Belongs to the CinA family. | 0.715 |
| AKO96632.1 | AKO96631.1 | MALG_01447 | MALG_01446 | Signal transduction histidine kinase NR(II), nitrogen specific. | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.938 |
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