STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO96634.1Nitrogen regulation protein NtrY. (772 aa)    
Predicted Functional Partners:
AKO96635.1
Nitrogen assimilation regulatory protein NtrX.
 0.994
AKO96633.1
Nitrogen regulation protein NtrC.
 
 0.782
AKO96632.1
Signal transduction histidine kinase NR(II), nitrogen specific.
 
   
0.752
AKO96631.1
Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
     
 0.739
AKO98752.1
Flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
  
 0.737
AKO96636.1
Lipoprotein.
       0.732
AKO98650.1
Hypothetical protein.
 
 
 0.671
AKO98558.1
Hypothetical protein.
  
     0.653
AKO96568.1
Hypothetical protein.
  
     0.645
AKO96801.1
Response regulator; Containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.
 
 0.638
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.