STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO96656.1FeS assembly ATPase SufC. (251 aa)    
Predicted Functional Partners:
AKO96653.1
FeS assembly protein SufB.
 0.999
AKO96657.1
FeS assembly protein SufD.
 0.999
AKO96660.1
Cysteine desulfurase, SufSfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 0.998
AKO97178.1
FeS assembly SUF system protein.
  
 0.965
AKO96659.1
Yip1 domain protein.
     
 0.911
AKO96658.1
Hypothetical protein.
     
 0.910
AKO96534.1
NifU-like protein involved in Fe-S cluster formation.
  
  
 0.907
AKO96652.1
Cysteine sulfinate desulfinase/cysteine desulfurase; And related enzymes.
  
 
 0.888
AKO95345.1
Selenocysteine lyase.
 
  
 0.865
AKO96917.1
SufE protein probably involved in Fe-S center assembly.
 
 
 0.827
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.