STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO96872.1TRAP transporter, DctM subunit. (437 aa)    
Predicted Functional Partners:
AKO96873.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
     0.917
AKO96874.1
TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component.
 
  
 0.909
AKO96716.1
TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component.
 
  
 0.797
AKO97206.1
TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
  
 0.792
AKO96002.1
TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
  
 0.761
AKO96871.1
Hypothetical protein.
       0.714
AKO95415.1
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family.
     0.508
AKO96875.1
Transposase of ISMdi27, IS21 family.
       0.423
AKO96876.1
Putative transposase.
       0.423
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.