STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO96887.1Opine oxidase subunit B. (374 aa)    
Predicted Functional Partners:
AKO96885.1
Putative NAD(FAD)-dependent dehydrogenase.
 0.973
AKO96886.1
Opine oxidase subunit C.
 
  
 0.952
AKO98548.1
Glycine/D-amino acid oxidase (deaminating).
  
  
 
0.915
AKO96884.1
ABC-type histidine transport system, ATPase component.
       0.773
AKO96124.1
Sarcosine oxidase, alpha subunit family, heterotetrameric form; Belongs to the GcvT family.
  
 0.760
AKO96492.1
Sarcosine oxidase, alpha subunit family, heterotetrameric form; Belongs to the GcvT family.
  
 0.760
AKO96883.1
Lysine-arginine-ornithine-binding protein periplasmic protein; Belongs to the bacterial solute-binding protein 3 family.
  
    0.715
AKO96888.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.679
AKO96880.1
Putative translation initiation inhibitor, yjgF family.
 
    0.632
AKO96881.1
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
       0.534
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.