STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO96939.1ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. (434 aa)    
Predicted Functional Partners:
AKO96941.1
ABC-type branched-chain amino acid transport system, ATPase component.
 
 0.995
AKO96940.1
Branched-chain amino acid ABC-type transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.993
AKO96942.1
ABC-type branched-chain amino acid transport system, ATPase component.
 
 0.990
AKO97583.1
ABC-type branched-chain amino acid transport system, ATPase component.
 
 
 0.967
AKO95310.1
ABC-type branched-chain amino acid transport system, ATPase component.
 
 0.962
AKO97582.1
ABC-type branched-chain amino acid transport system, ATPase component.
 
 0.958
AKO95315.1
ABC-type branched-chain amino acid transport system, ATPase component.
 
 0.956
AKO97811.1
ABC-type branched-chain amino acid transport system, ATPase component.
 
 0.956
AKO96943.1
ABC-type branched-chain amino acid transport system, periplasmic component.
 
 
 0.952
AKO97812.1
ABC-type branched-chain amino acid transport system, ATPase component.
 
 0.924
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.