STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO96946.1Transcriptional regulator; Containing an amidase domain and an AraC-type DNA-binding HTH domain. (333 aa)    
Predicted Functional Partners:
AKO96491.1
Sarcosine oxidase delta subunit.
 
    0.719
AKO96492.1
Sarcosine oxidase, alpha subunit family, heterotetrameric form; Belongs to the GcvT family.
 
     0.633
AKO97094.1
5,10-methylenetetrahydrofolate reductase.
  
     0.602
AKO96947.1
3-deoxy-7-phosphoheptulonate synthase, class II.
       0.537
AKO96488.1
Sarcosine oxidase, beta subunit family, heterotetrameric form.
  
     0.530
AKO95389.1
Sarcosine dehydrogenase (aminomethyltransferase); Belongs to the GcvT family.
 
     0.508
AKO96124.1
Sarcosine oxidase, alpha subunit family, heterotetrameric form; Belongs to the GcvT family.
 
     0.486
AKO96493.1
Sarcosine oxidase gamma subunit.
 
    0.486
AKO96126.1
Sarcosine oxidase, beta subunit family, heterotetrameric form.
  
     0.413
AKO95899.1
Putative transcription factor, similar to eukaryotic MBF1.
  
    0.407
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.