STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO97006.1Phage terminase, small subunit, putative, P27 family. (168 aa)    
Predicted Functional Partners:
AKO97009.1
DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.949
AKO97008.1
Hypothetical protein.
 
     0.879
AKO97005.1
Site-specific recombinase, DNA invertase Pin-like protein.
 
   
 0.838
AKO97007.1
Hypothetical protein.
  
    0.785
AKO96907.1
Phage terminase-like protein, large subunit.
 
    0.727
AKO96832.1
Prophage tail length tape measure protein.
 
     0.449
AKO96597.1
Restriction endonuclease.
  
    0.408
AKO98278.1
HNH endonuclease.
  
    0.408
AKO97298.1
Phage portal protein, HK97 family.
 
  
 0.407
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.