STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO97008.1Hypothetical protein. (72 aa)    
Predicted Functional Partners:
AKO97009.1
DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.955
AKO97006.1
Phage terminase, small subunit, putative, P27 family.
 
     0.879
AKO97007.1
Hypothetical protein.
       0.777
AKO96824.1
Phage portal protein, lambda family.
  
     0.723
AKO97005.1
Site-specific recombinase, DNA invertase Pin-like protein.
 
     0.634
AKO96826.1
Hypothetical protein.
 
     0.613
AKO97001.1
Phage terminase, small subunit, putative, P27 family.
 
     0.450
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.