STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO97206.1TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (359 aa)    
Predicted Functional Partners:
AKO97204.1
TRAP-type mannitol/chloroaromatic compound transport system, large permease component.
 
  
 0.895
AKO97205.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
    0.825
AKO96715.1
TRAP transporter, DctM subunit.
 
  
 0.818
AKO96003.1
TRAP-type mannitol/chloroaromatic compound transport system, large permease component.
 
  
 0.802
AKO96872.1
TRAP transporter, DctM subunit.
 
  
 0.792
AKO96874.1
TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component.
  
     0.760
AKO97804.1
TRAP transporter, DctM subunit.
  
    0.675
AKO96344.1
TRAP transporter, DctM subunit.
  
    0.672
AKO96383.1
TRAP transporter, DctM subunit.
  
    0.564
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.