STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO97232.1Putative permease, DMT superfamily. (284 aa)    
Predicted Functional Partners:
AKO97235.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
       0.547
AKO97233.1
Transcriptional regulator.
       0.538
AKO97234.1
Trimethylamine:corrinoid methyltransferase; Belongs to the trimethylamine methyltransferase family.
       0.538
AKO97499.1
Rho termination factor, N-terminal domain protein.
 
      0.537
AKO95778.1
Export-related protein chaperone CsaA.
  
   0.488
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.