STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO97260.1Transcriptional regulator. (225 aa)    
Predicted Functional Partners:
AKO97262.1
CitB domain protein.
 
     0.835
AKO97261.1
Precorrin 3B synthase CobZ.
 
     0.822
AKO95927.1
Transcriptional regulator.
  
    0.769
AKO96016.1
Transcriptional regulator.
  
    0.759
AKO96372.1
Transcriptional regulator.
  
    0.680
AKO98221.1
Transcriptional regulator.
  
    0.670
AKO97758.1
Transcriptional regulator.
  
    0.605
AKO97259.1
And related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
     0.543
AKO97258.1
Hypothetical protein.
       0.468
AKO97256.1
Hypothetical protein.
 
    0.447
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.