STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO97287.1Gene Transfer Agent (GTA) ORFG12. (210 aa)    
Predicted Functional Partners:
AKO97284.1
Gene Transfer Agent host specificity protein.
 
 
   0.993
AKO97286.1
Phage conserved hypothetical protein; BR0599.
 
 
 
 0.993
AKO97291.1
Gene Transfer Agent tail protein-1 family; TP901.
 
 
   0.992
AKO97292.1
Gene Transfer Agent (GTA) ORFG08.
 
   0.990
AKO97293.1
Bacteriophage head-tail adaptor.
 
 
 
 0.987
AKO97294.1
Gene Transfer Agent (GTA) ORFG06 gp8 family; phiE125.
 
 
 
 0.987
AKO97295.1
Phage major capsid protein, HK97 family.
 
 
 
 0.975
AKO97288.1
Gene Transfer Agent (GTA) ORFG11.
 
    0.969
AKO97285.1
Putative phage cell wall peptidase, NlpC/P60 family.
 
     0.968
AKO97298.1
Phage portal protein, HK97 family.
 
 
   0.964
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.