STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO97291.1Gene Transfer Agent tail protein-1 family; TP901. (137 aa)    
Predicted Functional Partners:
AKO97287.1
Gene Transfer Agent (GTA) ORFG12.
 
 
   0.992
AKO97292.1
Gene Transfer Agent (GTA) ORFG08.
 
 
   0.991
AKO97294.1
Gene Transfer Agent (GTA) ORFG06 gp8 family; phiE125.
 
   0.991
AKO97284.1
Gene Transfer Agent host specificity protein.
 
 
   0.990
AKO97286.1
Phage conserved hypothetical protein; BR0599.
 
 
   0.990
AKO97293.1
Bacteriophage head-tail adaptor.
 
 
   0.988
AKO97295.1
Phage major capsid protein, HK97 family.
 
   0.979
AKO97298.1
Phage portal protein, HK97 family.
 
   0.972
AKO97290.1
Gene Transfer Agent (GTA) ORFG10.
 
    0.971
AKO97288.1
Gene Transfer Agent (GTA) ORFG11.
 
     0.968
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.