STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO97319.1Heparinase II/III-like protein. (776 aa)    
Predicted Functional Partners:
AKO97320.1
ABC-type sugar transport system, periplasmic component.
  
 0.898
AKO97322.1
ABC-type polysaccharide transport system, permease component.
 
  
 0.865
AKO97321.1
ABC-type sugar transport system, permease component.
 
  
 0.862
AKO97325.1
Na+-driven multidrug efflux pump.
 
     0.812
AKO97318.1
Cupin domain protein.
 
     0.792
AKO97317.1
And related beta-hydroxyacid dehydrogenases.
 
     0.647
AKO97323.1
ABC-type sugar transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
     0.584
AKO97324.1
Transcriptional regulator.
 
     0.561
AKO97112.1
Hypothetical protein.
  
 
 0.473
AKO96010.1
Beta-fructosidase (levanase/invertase).
  
   
 0.441
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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