STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO97375.1Hypothetical protein. (145 aa)    
Predicted Functional Partners:
AKO97376.1
ABC-type histidine transport system, ATPase component; TC 3.A.1.3.1.
       0.561
AKO97374.1
Hypothetical protein.
       0.497
AKO95545.1
Hypothetical protein.
  
     0.493
AKO97377.1
ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein.
       0.453
AKO96271.1
Chloride channel protein EriC.
 
     0.426
AKO97378.1
ABC-type arginine transport system, permease component.
       0.407
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.