STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO97446.1Hypothetical protein. (347 aa)    
Predicted Functional Partners:
AKO97445.1
Putative metal-dependent hydrolase of the TIM-barrel fold protein.
 
  
 0.991
AKO97448.1
Uncharacterized protein, LmbE-like protein.
 
  
 0.991
AKO97451.1
Hypothetical protein; Protocatechuate 4,5-dioxygenase beta subunit.
 
  
 0.926
AKO97450.1
Protocatechuate 4,5-dioxygenase, alpha subunit.
 
  
 0.912
AKO97447.1
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase.
 
   
 0.911
AKO97449.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
    0.814
AKO97132.1
Enoyl-CoA hydratase/carnithine racemase.
   
 
  0.808
AKO96027.1
Acylphosphatase.
     
  0.800
AKO97254.1
Hypothetical protein.
    0.714
AKO96519.1
Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
  
 0.698
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.