STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO97643.1Putative transcriptional regulator. (286 aa)    
Predicted Functional Partners:
AKO97642.1
Mu transposase, Mu DNA binding protein, I gamma subdomain/Bacteriophage Mu transposase.
       0.782
AKO97644.1
Hypothetical protein.
       0.773
AKO95970.1
ATPase MipZ.
  
 
 0.606
AKO98723.1
Chromosome partitioning protein ParA.
  
 
 0.606
AKO97640.1
Hypothetical protein.
     
 0.600
AKO97636.1
Hypothetical protein; DUF3164.
       0.599
AKO97632.1
Mu-like prophage protein gp16.
       0.597
AKO97639.1
Hypothetical protein.
       0.593
AKO97629.1
Hypothetical protein.
       0.589
AKO97631.1
Hypothetical protein.
       0.589
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.