STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO97680.1Putative ATPase. (471 aa)    
Predicted Functional Partners:
AKO97682.1
Hypothetical protein; TIGR01620.
 
  
 0.994
AKO97681.1
Acetyltransferase.
  
    0.831
truA
Pseudouridylate synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
       0.728
AKO98610.1
Murein endopeptidase.
  
     0.647
AKO97683.1
Glycosyltransferase.
       0.576
AKO97945.1
Hypothetical protein.
  
     0.468
AKO95543.1
Ribonuclease I; Belongs to the RNase T2 family.
  
     0.461
AKO97199.1
Hypothetical protein; DUF2852.
  
    0.440
AKO98388.1
Nitroreductase.
  
     0.435
AKO97875.1
RecD-like DNA helicase.
 
     0.429
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.