STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO97804.1TRAP transporter, DctM subunit. (431 aa)    
Predicted Functional Partners:
AKO97806.1
TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
 
  0.922
AKO97805.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 0.890
AKO97803.1
And related enzymes.
       0.773
AKO95415.1
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family.
 
 0.735
AKO96716.1
TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component.
  
    0.711
AKO96874.1
TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component.
  
    0.699
AKO96868.1
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family.
 
 0.695
AKO97206.1
TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
  
    0.675
AKO96149.1
TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
 
 0.643
AKO97807.1
Glutathione S-transferase.
       0.605
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.