STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO97897.1Acyl dehydratase. (348 aa)    
Predicted Functional Partners:
AKO98531.1
Acyl-CoA dehydrogenase.
 
 0.984
AKO98157.1
Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.979
AKO97900.1
L-malyl-CoA/beta-methylmalyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.925
AKO97878.1
crotonyl-CoA reductase.
 
 0.912
AKO97880.1
methylmalonyl-CoA mutase.
 
  
 0.883
AKO97899.1
Putative membrane protein.
  
    0.865
AKO97898.1
Putative conserved small protein.
       0.864
AKO98490.1
Non-ribosomal peptide synthase.
  
 0.858
AKO97896.1
Succinate dehydrogenase, cytochrome b556 subunit.
  
  
 0.596
AKO97895.1
Succinate dehydrogenase, hydrophobic membrane anchor protein.
     
 0.570
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.