STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO98025.1Homocysteine/selenocysteine methylase (S-methylmethionine-dependent). (312 aa)    
Predicted Functional Partners:
AKO97096.1
Pterin binding protein enzyme.
 
   
 0.795
AKO96793.1
Putative cobalamin binding protein.
 
     0.680
AKO96795.1
Methionine synthase I (cobalamin-dependent), methyltransferase domain protein.
  
  
 0.663
AKO98024.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
 
    0.661
AKO98026.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
 
    0.658
AKO98027.1
Putative transcriptional regulator.
  
    0.638
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
     
 0.547
AKO98028.1
GAF domain protein-containing protein.
       0.475
msrA
methionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
      0.437
AKO98072.1
Serine kinase of the HPr protein, regulates carbohydrate metabolism.
      
 0.404
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.