STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO98176.1Transcriptional regulator/sugar kinase. (399 aa)    
Predicted Functional Partners:
AKO98177.1
ABC-type sugar transport system, periplasmic component.
 
  
 0.904
AKO98179.1
ABC-type sugar transport system, ATPase component.
 
   
 0.846
AKO98369.1
Glutamate synthase domain protein 2.
  
  
 0.791
AKO98178.1
Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component.
 
  
 0.785
AKO97575.1
Na+/proline symporter.
     
 0.650
AKO97745.1
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
     
 0.643
AKO96338.1
Dihydrodipicolinate synthase/N-acetylneuraminate lyase.
  
  
 0.614
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
  
  
 0.614
AKO96111.1
Hypothetical protein; DUF993.
  
  
 0.581
AKO95876.1
Malic enzyme.
  
  
 0.560
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.