STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO98195.1Putative endonuclease distantly; Related to archaeal Holliday junction resolvase; Belongs to the UPF0102 family. (134 aa)    
Predicted Functional Partners:
rsmI
Putative S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.840
gshB
Glutathione synthetase, prokaryotic; Belongs to the prokaryotic GSH synthase family.
       0.747
AKO98197.1
ABC-type branched-chain amino acid transport system, periplasmic component.
       0.718
AKO98193.1
Esterase/lipase.
       0.692
glnD
[Protein-PII] uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.
       0.684
AKO98747.1
Flagellar hook-associated protein FlgL.
   
    0.499
AKO95693.1
Diguanylate cyclase (GGDEF) domain protein.
   
    0.489
AKO97881.1
Diguanylate cyclase (GGDEF) domain protein.
   
    0.489
AKO98062.1
Hypothetical protein.
  
     0.489
AKO97574.1
Flagellar motor switch protein.
   
    0.465
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.