STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO98215.1And related Zn-dependent dehydrogenases. (337 aa)    
Predicted Functional Partners:
AKO98217.1
Hypothetical protein.
       0.735
AKO98216.1
Dehydrogenase with variable specificity; Related to short-chain alcohol dehydrogenases.
 
    0.733
AKO98218.1
Tricarboxylate transport membrane protein TctA.
       0.680
AKO98219.1
Tripartite tricarboxylate transporter TctB family.
       0.680
AKO98220.1
Tricarboxylate transport protein TctC.
       0.675
AKO98221.1
Transcriptional regulator.
       0.643
AKO96452.1
Zn-dependent alcohol dehydrogenase.
 
0.499
cobT
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
      0.442
AKO96041.1
And related Zn-dependent oxidoreductases.
 
  
 0.428
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.