STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO98238.1Hypothetical protein. (395 aa)    
Predicted Functional Partners:
AKO98240.1
Putative translation initiation inhibitor, yjgF family.
      0.884
AKO98237.1
Pterin-4a-carbinolamine dehydratase.
  
    0.868
AKO98239.1
Glycerophosphoryl diester phosphodiesterase.
       0.778
bpt
Putative arginyl-tRNA:protein arginylyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.
 
     0.581
AKO98241.1
Type I secretion membrane fusion protein, HlyD family.
       0.562
AKO98242.1
Type I secretion system ABC transporter, PrtD family.
       0.542
AKO98243.1
Lipoprotein VacJ.
       0.501
AKO98244.1
Toluene tolerance protein Ttg2D; The genes encoding the proteins in this entry are all found in bacteria containing the machinery necessary for biosynthesis of hopanoid lipids. Furthermore, these genes are usually located proximal to other components of this biological process. The proteins are members of a family of putative transporters known as toluene tolerance protein Ttg2D, although it is unlikely that the proteins in this entry have anything to do with toluene per-se.
       0.495
clpS
Hypothetical protein; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
 
     0.454
AKO98676.1
Small-conductance mechanosensitive channel.
       0.416
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.