STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO98242.1Type I secretion system ABC transporter, PrtD family. (574 aa)    
Predicted Functional Partners:
AKO98241.1
Type I secretion membrane fusion protein, HlyD family.
  
 0.960
AKO95685.1
ABC-type polar amino acid transport system, ATPase component.
 
     
0.899
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.898
AKO96991.1
Type I secretion membrane fusion protein, HlyD family.
  
 0.831
AKO95294.1
Type I secretion membrane fusion protein, HlyD family.
  
 0.795
AKO97724.1
Hemolysin-type calcium-binding protein repeat protein (2 copies).
 
 
 0.738
AKO95617.1
Hemolysin-type calcium-binding protein repeat protein (2 copies).
 
 
 0.731
AKO97323.1
ABC-type sugar transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
     
0.708
AKO96924.1
Hemolysin-type calcium-binding protein repeat protein (2 copies).
 
 
 0.704
AKO98567.1
Hemolysin-type calcium-binding protein repeat protein (2 copies).
 
 
 0.694
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.