STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO98261.1Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (316 aa)    
Predicted Functional Partners:
AKO96865.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.685
AKO97823.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.600
AKO96103.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.597
AKO98399.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.592
katG-2
Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
     
 0.535
AKO96165.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.499
AKO98260.1
Hypothetical protein.
  
    0.464
AKO96309.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.461
AKO95888.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.450
AKO95983.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.447
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.