STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO98268.1Domain protein of unknown function; DUF3576. (161 aa)    
Predicted Functional Partners:
AKO98555.1
Hypothetical protein; DUF3035.
  
     0.764
AKO97052.1
Small protein A (tmRNA-binding protein).
  
     0.704
AKO98130.1
rpsU-divergently transcribed protein.
  
     0.677
leuS
leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.655
AKO95385.1
Penicillin-binding protein 2.
  
     0.654
AKO98267.1
Hypothetical protein.
 
   
 0.644
AKO95306.1
Putative secreted (periplasmic) protein; DUF2159.
 
     0.582
AKO96916.1
Hypothetical protein.
  
     0.574
AKO97568.1
Hypothetical protein.
  
     0.571
AKO95305.1
DNA polymerase III, delta subunit.
 
     0.569
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.