STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO98324.1ABC-type polysaccharide/polyol phosphate export system, permease component. (273 aa)    
Predicted Functional Partners:
AKO95381.1
Capsular polysaccharide ABC transporter, ATP-binding protein.
 
 0.995
AKO95382.1
Capsule polysaccharide export protein.
 
  
 0.969
AKO97597.1
Capsule polysaccharide export protein.
 
  
 0.961
AKO97596.1
Periplasmic protein involved in polysaccharide export.
 
  
 0.892
AKO98330.1
Hypothetical protein.
 
  
 0.859
AKO97379.1
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
    
  0.853
AKO98331.1
Core-2/I-Branching enzyme.
 
     0.851
AKO96573.1
Putative permease; Overlaps another CDS with the same product name.
    
  0.849
AKO96574.1
Putative permease; Overlaps another CDS with the same product name.
    
  0.848
AKO98738.1
Periplasmic protein involved in polysaccharide export.
 
  
 0.845
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.