STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO98423.1Transcriptional regulator. (220 aa)    
Predicted Functional Partners:
AKO95276.1
Transcriptional regulator.
  
     0.769
AKO95336.1
Transcriptional regulator.
  
     0.681
AKO98422.1
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.637
AKO95927.1
Transcriptional regulator.
  
    0.636
AKO98424.1
Putrescine ABC transporter putrescine-binding protein PotF; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
     0.602
AKO97765.1
Transcriptional regulator.
  
    0.599
AKO95274.1
Transcriptional regulator.
  
    0.579
AKO98421.1
Acetyltransferase; Including N-acetylases of ribosomal proteins.
  
    0.550
AKO96016.1
Transcriptional regulator.
  
    0.537
AKO98429.1
Glycine/D-amino acid oxidase (deaminating).
 
    0.507
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.