STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO98430.1Hypothetical protein. (358 aa)    
Predicted Functional Partners:
AKO98431.1
Hypothetical protein.
 
     0.916
AKO98435.1
Hypothetical protein.
 
     0.884
AKO98432.1
ATP-dependent Zn protease.
 
     0.871
AKO98433.1
Hypothetical protein.
 
     0.871
AKO98436.1
Hypothetical protein.
 
     0.800
AKO95804.1
Putative extracellular nuclease.
  
     0.691
AKO98437.1
Hypothetical protein; DUF1523.
 
     0.633
potA-3
Putrescine transport ATP-binding protein PotG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
       0.476
AKO98426.1
Hypothetical protein.
       0.476
AKO98427.1
Putrescine transport system permease protein PotH; TC 3.A.1.11.2.
       0.476
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.