STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO98485.1Putative dehydrogenase; And related proteins. (675 aa)    
Predicted Functional Partners:
AKO98484.1
Putative glycosyltransferase.
    0.959
AKO98483.1
Glycosyltransferase.
 
  
 0.919
AKO98488.1
Non-ribosomal peptide synthetase.
 
   
 0.909
AKO98481.1
Putative dehydrogenase; And related proteins.
 
    0.898
AKO98490.1
Non-ribosomal peptide synthase.
 
 
 0.863
AKO98486.1
Exopolysaccharide biosynthesis domain protein.
 
  
 0.850
rpsJ
Ribosomal protein S10, bacterial/organelle; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
  
  0.840
AKO98443.1
Hypothetical protein.
 
   
 0.831
AKO98491.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
  
 0.825
AKO98493.1
Glycosyltransferase.
 
  
 0.824
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.