STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO98600.1Putative transcriptional regulator. (189 aa)    
Predicted Functional Partners:
AKO98597.1
And related Zn-dependent dehydrogenases.
 
     0.645
kbl
2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
 
     0.619
AKO98027.1
Putative transcriptional regulator.
  
  
 0.600
AKO95448.1
Transcriptional regulator.
  
  
 0.568
AKO98601.1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.539
AKO98598.1
Methylase involved in ubiquinone/menaquinone biosynthesis.
       0.526
AKO96161.1
Transcriptional regulator.
  
  
 0.507
AKO97087.1
Putative transcriptional regulator.
  
    0.506
AKO95868.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
  
 0.500
AKO97748.1
HipA N-terminal domain protein.
 
 
 0.496
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.