STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO98687.1Glycolate dehydrogenase, subunit GlcD. (496 aa)    
Predicted Functional Partners:
AKO98689.1
Glycolate dehydrogenase, iron-sulfur subunit GlcF.
 
 0.997
AKO98688.1
Glycolate dehydrogenase, FAD-binding protein subunit GlcE.
  
  0.994
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
 
 
 0.917
AKO97884.1
Glyoxylate reductase GyaR; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.915
AKO97195.1
Entner-Doudoroff aldolase.
   
 
 0.909
AKO98055.1
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase.
  
 
 0.907
AKO95383.1
And related dehydrogenases.
  
 
 0.906
AKO95587.1
2-phosphoglycolate phosphatase, prokaryotic.
    
 0.905
AKO95680.1
3-4; variant 3 with third motif protein having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif protein having DxD or Dx(3-4)E.
    
 0.905
AKO96076.1
3-4; variant 3 with third motif protein having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif protein having DxD or Dx(3-4)E.
    
 0.905
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.