STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO98776.1FlgN protein. (118 aa)    
Predicted Functional Partners:
AKO98777.1
Flagellar protein FlgJ.
 
     0.953
AKO98774.1
Flagellar biosynthesis regulator FlaF.
 
     0.586
AKO98778.1
Hypothetical protein.
       0.576
AKO98272.1
Hypothetical protein.
  
     0.556
AKO98751.1
Flagellar biosynthesis/type III secretory pathway protein FliH.
  
     0.549
AKO97574.1
Flagellar motor switch protein.
  
     0.548
AKO97210.1
Hypothetical protein.
  
     0.537
AKO97021.1
Tellurite resistance protein TrgA.
  
     0.536
AKO97347.1
Dihydroneopterin aldolase.
  
     0.536
AKO98775.1
Flagellin protein FlaA; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
     0.535
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.