STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO98777.1Flagellar protein FlgJ. (93 aa)    
Predicted Functional Partners:
AKO96522.1
Flagellar motor switch protein FliG.
 
  
 0.999
AKO98145.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
   
    0.999
AKO98705.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
    0.999
AKO98745.1
Flagellar hook protein FlgE.
 
  
 0.999
AKO98762.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
    0.999
AKO98769.1
Flagellar basal-body rod protein FlgC; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
  
 0.999
flgH
Flagellar basal body L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
  
 0.992
AKO98779.1
Flagellar hook-length control protein FliK.
 
  
 0.979
AKO98770.1
Flagellar basal body protein FlgB.
 
 
 0.975
AKO98780.1
Flagellar hook capping protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.963
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.