STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB05897.1Glycosyl transferase family 2. (257 aa)    
Predicted Functional Partners:
SFB28742.1
Glycosyl transferase family 4.
 
 
  0.807
SFB05878.1
Hypothetical protein.
       0.779
SFB28765.1
Uncharacterized membrane-anchored protein.
 
     0.776
SFA85214.1
Protein of unknown function.
 
     0.774
SFB05915.1
Hypothetical protein.
     0.768
SFB28754.1
Copper transport outer membrane protein, MctB.
 
     0.750
mshC
L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily.
     
 0.641
SFB28729.1
Putative peptidoglycan lipid II flippase.
  
     0.628
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
      
 0.625
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
     
 0.620
Your Current Organism:
Cellulomonas marina
NCBI taxonomy Id: 988821
Other names: CGMCC 4.6945, Cellulomonas marina Zhang et al. 2013, Cellulomonas sp. FXJ8.089, DSM 24960, strain FXJ8.089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.