STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRQ14882.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (127 aa)    
Predicted Functional Partners:
KRQ14883.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.771
KRQ14887.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.577
KRQ13580.1
Chemotaxis protein chel; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.489
KRQ14965.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.420
rpiA
Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
   
    0.407
KRQ05485.1
Photosystem reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.400
Your Current Organism:
Bradyrhizobium manausense
NCBI taxonomy Id: 989370
Other names: B. manausense, Bradyrhizobium manausense Silva et al., 2014, Bradyrhizobium sp. BR 3307, Bradyrhizobium sp. BR 3310, Bradyrhizobium sp. BR 3315, Bradyrhizobium sp. BR 3323, Bradyrhizobium sp. BR 3351, Bradyrhizobium sp. BR 3361, HAMBI 3596, strain BR 3351
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.