STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRQ14653.1Dodecin flavoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. (73 aa)    
Predicted Functional Partners:
KRQ17355.1
General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family.
  
    0.760
KRQ00099.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family.
   
    0.721
KRQ13608.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.564
KRQ15970.1
Cell envelope biogenesis protein AsmA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.506
KRQ01973.1
Cell envelope biogenesis protein AsmA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.506
KRQ14794.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.500
KRQ07286.1
NIPSNAP family containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.480
KRQ03475.1
NIPSNAP family containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.480
KRQ04215.1
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
  
    0.430
Your Current Organism:
Bradyrhizobium manausense
NCBI taxonomy Id: 989370
Other names: B. manausense, Bradyrhizobium manausense Silva et al., 2014, Bradyrhizobium sp. BR 3307, Bradyrhizobium sp. BR 3310, Bradyrhizobium sp. BR 3315, Bradyrhizobium sp. BR 3323, Bradyrhizobium sp. BR 3351, Bradyrhizobium sp. BR 3361, HAMBI 3596, strain BR 3351
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