STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRQ13276.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (461 aa)    
Predicted Functional Partners:
KRQ13275.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.996
KRQ05594.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.991
KRQ09908.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.962
KRQ14255.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.950
KRQ13319.1
Surfeit locus 1 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.921
KRQ09890.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
0.916
KRQ13277.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.913
KRQ15420.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.909
KRQ10433.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.904
KRQ13280.1
Cytochrome O ubiquinol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.895
Your Current Organism:
Bradyrhizobium manausense
NCBI taxonomy Id: 989370
Other names: B. manausense, Bradyrhizobium manausense Silva et al., 2014, Bradyrhizobium sp. BR 3307, Bradyrhizobium sp. BR 3310, Bradyrhizobium sp. BR 3315, Bradyrhizobium sp. BR 3323, Bradyrhizobium sp. BR 3351, Bradyrhizobium sp. BR 3361, HAMBI 3596, strain BR 3351
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.