STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ23670.1DUF218 domain-containing protein. (235 aa)    
Predicted Functional Partners:
SEQ23719.1
Cell division transport system permease protein.
 
     0.798
plsC
1-acyl-sn-glycerol-3-phosphate acyltransferase.
 
     0.723
ftsQ
Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
     0.720
ftsE
Cell division transport system ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division.
 
     0.661
SEP69245.1
DNA polymerase III, chi subunit.
 
     0.659
lptD_2
LPS-assembly protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
    0.654
SER61762.1
Protein of unknown function.
  
     0.603
SEQ79714.1
Hypothetical protein.
  
     0.593
ros
Transcriptional regulator, MucR family.
  
     0.588
dnaJ_3
DnaJ domain-containing protein.
  
     0.577
Your Current Organism:
Pseudovibrio axinellae
NCBI taxonomy Id: 989403
Other names: DSM 24994, NCIMB 14761, P. axinellae, Pseudovibrio sp. Ad2, strain Ad2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.