STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER45538.1Hypothetical protein. (85 aa)    
Predicted Functional Partners:
SER45499.1
Transcriptional regulator, contains XRE-family HTH domain.
       0.762
SER45392.1
Hypothetical protein.
       0.717
SER45426.1
Hypothetical protein.
       0.717
SER45458.1
Hypothetical protein.
       0.717
SER45570.1
Hypothetical protein.
       0.547
SER45359.1
Hypothetical protein.
       0.533
SER45314.1
Hypothetical protein.
       0.476
SER45282.1
Hypothetical protein.
       0.462
SER45610.1
DNA-binding transcriptional regulator, CsgD family.
       0.444
SER45647.1
Protein gp37.
       0.444
Your Current Organism:
Pseudovibrio axinellae
NCBI taxonomy Id: 989403
Other names: DSM 24994, NCIMB 14761, P. axinellae, Pseudovibrio sp. Ad2, strain Ad2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.