STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL19247.1Hypothetical protein. (44 aa)    
Predicted Functional Partners:
GAL19246.1
Formate dehydrogenase -O gamma subunit.
       0.763
GAL19245.1
Putative formate dehydrogenase iron-sulfur subunit.
       0.745
GAL19244.1
Formate dehydrogenase-O major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.728
GAL19243.1
Formate dehydrogenase subunit or accessory protein.
       0.719
GAL19242.1
Putative formate dehydrogenase-specific chaperone.
       0.509
GAL19241.1
Iron-sulfur cluster-binding protein.
       0.504
GAL19248.1
Hypothetical protein.
       0.461
GAL19240.1
Iron-sulfur cluster-binding protein.
       0.423
GAL19239.1
Iron-sulfur cluster-binding protein.
       0.422
Your Current Organism:
Vibrio maritimus
NCBI taxonomy Id: 990268
Other names: LMG 25439, LMG:25439, V. maritimus, Vibrio maritimus Chimetto et al. 2011, Vibrio sp. JCM 19235, Vibrio sp. JCM 19240, Vibrio sp. R-40493, strain R-40493
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.