STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL17491.1Enterobactin receptor VctA. (445 aa)    
Predicted Functional Partners:
GAL17492.1
Enterobactin receptor VctA.
     0.991
GAL19579.1
Ferric siderophore transport system periplasmic binding protein TonB.
 
 
 0.835
GAL17470.1
Hypothetical protein.
  
 
 0.813
GAL19580.1
Ferric siderophore transport system periplasmic binding protein TonB.
  
 
 0.813
GAL23154.1
Enterobactin receptor VctA.
 
     0.779
GAL16518.1
Hypothetical protein.
  
 
   0.698
GAL16519.1
Hypothetical protein.
  
 
   0.690
GAL16520.1
Hypothetical protein.
  
 
   0.683
GAL17490.1
Putative membrane protein.
 
     0.651
GAL17593.1
Putaive Fe-regulated protein B.
 
 
 0.604
Your Current Organism:
Vibrio maritimus
NCBI taxonomy Id: 990268
Other names: LMG 25439, LMG:25439, V. maritimus, Vibrio maritimus Chimetto et al. 2011, Vibrio sp. JCM 19235, Vibrio sp. JCM 19240, Vibrio sp. R-40493, strain R-40493
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.