STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL19595.1Branched-chain amino acid transport system carrier protein; Component of the transport system for branched-chain amino acids. (436 aa)    
Predicted Functional Partners:
GAL19596.1
Hypothetical protein.
       0.773
GAL19594.1
tRNA (adenine37-N(6))-methyltransferase TrmN6; Belongs to the methyltransferase superfamily.
     
 0.530
GAL19593.1
Hypothetical protein.
     
 0.512
sstT
Sodium/dicarboxylate symporter; Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system). Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
   
 0.481
rnt
Histidine permease YuiF; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis.
  
   
 0.439
GAL19750.1
Methionine ABC transporter permease protein.
 
  
 0.434
GAL18939.1
L-cystine uptake protein TcyP; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
   
 0.411
GAL22125.1
Aspartokinase.
  
   
 0.410
GAL18183.1
AzlC family protein.
   
    0.406
GAL16738.1
Predicted arginine uptake transporter.
  
     0.402
Your Current Organism:
Vibrio maritimus
NCBI taxonomy Id: 990268
Other names: LMG 25439, LMG:25439, V. maritimus, Vibrio maritimus Chimetto et al. 2011, Vibrio sp. JCM 19235, Vibrio sp. JCM 19240, Vibrio sp. R-40493, strain R-40493
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.