STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPF00090.1Histidine kinase; COG0642 Signal transduction histidine kinase. (507 aa)    
Predicted Functional Partners:
EPE97018.1
Two-component histidine kinase/response regulator motif-containing protein; COG2770 FOG: HAMP domain.
  
 
0.915
EPE95891.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 
 0.855
EPE96674.1
Hypothetical protein; COG2203 FOG: GAF domain.
  
 
 0.818
PhoB
PhoB family transcriptional regulator; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 
 0.687
EPE99656.1
Hypothetical protein.
  
     0.672
EPE95574.1
COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain.
 
 
 0.638
EPE95575.1
Histidine kinase; COG0642 Signal transduction histidine kinase.
  
     0.631
EPF00143.1
Histidine kinase; COG0642 Signal transduction histidine kinase.
 
 
 0.622
EPE97865.1
Two-component response regulator transcriptional regulatory protein; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 
 0.613
EPE98349.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 
 0.598
Your Current Organism:
Rhizobium grahamii
NCBI taxonomy Id: 990285
Other names: R. grahamii CCGE 502, Rhizobium grahamii CCGE 502, Rhizobium grahamii str. CCGE 502, Rhizobium grahamii strain CCGE 502, Rhizobium sp. CCGE 502
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